STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000025483Si:ch211-194m7.4. (449 aa)    
Predicted Functional Partners:
ENSCHAP00000056832
Leucine-rich repeats and immunoglobulin-like domains 1.
    
 0.554
ENSCHAP00000048910
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.501
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.474
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.474
lrig3
Leucine rich repeats and immunoglobulin like domains 3.
    
 0.413
ENSCHAP00000024727
Relaxin family peptide receptor 1.
    
 0.403
ENSCHAP00000028999
Relaxin family peptide receptor 2a.
    
 0.403
ENSCHAP00000030605
Relaxin family peptide receptor 2, like.
    
 0.403
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.