STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcf7l1Transcription factor 7 like 1. (597 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.981
CTNNB1
Catenin beta 1.
    
 0.977
nlk
Nemo like kinase.
    
 0.971
ENSCHAP00000025324
annotation not available
    
 0.955
ENSCHAP00000050691
annotation not available
    
 0.932
LOC105906541
Protein groucho-2.
    
 0.932
ENSCHAP00000025501
CREB binding protein a.
   
 0.909
ENSCHAP00000031900
E1A binding protein p300 b.
   
 0.903
ENSCHAP00000024681
E1A binding protein p300 a.
   
 0.902
ENSCHAP00000062739
Lymphoid enhancer-binding factor 1.
  
 
0.901
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.