STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000026176Zgc:56231. (782 aa)    
Predicted Functional Partners:
LOC105902666
Rac GTPase-activating protein 1-like.
   
 0.965
RACGAP1
Rac GTPase activating protein 1.
   
 0.965
SHCBP1
SHC binding and spindle associated 1.
   
 0.895
ENSCHAP00000021105
Epithelial cell transforming 2.
   
 0.884
KIF18A
Kinesin family member 18A.
   
0.851
ENSCHAP00000034779
Kinesin family member 15.
   
 
0.846
LOC105906116
Kinesin-like protein KIF11-A.
   
0.845
ENSCHAP00000016573
annotation not available
   
0.845
ENSCHAP00000050217
annotation not available
   
0.845
ENSCHAP00000037894
annotation not available
   
 
 0.834
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.