STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMM22Translocase of inner mitochondrial membrane 22. (200 aa)    
Predicted Functional Partners:
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.998
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.998
timm29
Translocase of inner mitochondrial membrane 29.
   
 0.996
agk
Acylglycerol kinase.
   
 0.991
LOC105893756
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial-like.
   
 0.984
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
 0.983
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
   
 0.982
sdhc
Succinate dehydrogenase complex subunit C.
   
 0.963
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
 0.960
ENSCHAP00000002563
annotation not available
   
 0.939
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.