STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbProhibitin. (271 aa)    
Predicted Functional Partners:
PHB2
Prohibitin 2.
  
0.999
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.964
LOC105906452
AFG3-like protein 1.
  
 0.941
ENSCHAP00000021591
Si:ch1073-174d20.2.
  
 0.941
afg3l2
AFG3 like matrix AAA peptidase subunit 2.
  
 0.941
c1qbp
Complement C1q binding protein.
   
 0.907
stoml2
Stomatin like 2.
   
 
 0.901
ENSCHAP00000057491
Peptidase (mitochondrial processing) alpha.
  
 0.879
tufm
Tu translation elongation factor, mitochondrial.
  
 
 0.850
LOC105906143
ATP-dependent zinc metalloprotease YME1L1-like.
  
 0.850
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.