STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000026685Cellular retinoic acid binding protein 2, b. (146 aa)    
Predicted Functional Partners:
ENSCHAP00000026459
Fatty acid binding protein 6, ileal (gastrotropin).
   
 
 0.581
LOC105895513
Cytochrome P450 26B1.
   
 
 0.557
ENSCHAP00000042450
Fatty acid binding protein 2, intestinal.
  
  
0.522
ENSCHAP00000034019
Retinoic acid receptor, gamma b.
    
 0.521
LOC105891210
Cytochrome P450 26A1.
   
 
 0.520
LOC105903118
Fatty acid-binding protein, intestinal-like.
  
  
0.519
fabp1
Fatty acid binding protein 1.
     
 0.502
ENSCHAP00000011858
annotation not available
     
 0.502
ENSCHAP00000011990
annotation not available
     
 0.502
ENSCHAP00000042416
Fatty acid binding protein 2, intestinal.
     
0.500
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.