STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000026829annotation not available (697 aa)    
Predicted Functional Partners:
ENSCHAP00000042083
Guanylate cyclase 1 soluble subunit alpha 1.
  
0.949
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2.
  
0.948
ppil6
Peptidylprolyl isomerase like 6.
     
 0.867
ENSCHAP00000001628
Protein kinase cGMP-dependent 2.
   
 0.851
ENSCHAP00000003732
annotation not available
   
 0.851
ENSCHAP00000052817
annotation not available
   
 0.851
ENSCHAP00000054661
Phosphodiesterase 3B.
   
 0.782
pde6a
Phosphodiesterase 6A.
   
 0.775
pde6b
Phosphodiesterase 6B.
   
 0.769
pde6d
Phosphodiesterase 6D.
    
 0.760
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.