STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000026860Cyclin-dependent kinase 2 associated protein 2. (110 aa)    
Predicted Functional Partners:
LOC105905879
methyl-CpG-binding domain protein 3-like.
   
 
 0.768
ENSCHAP00000011383
annotation not available
   
 
 0.652
LOC105893332
Histone-binding protein RBBP7.
   
 
 0.652
ENSCHAP00000055178
Methyl CpG binding protein 2.
   
 
 0.644
ENSCHAP00000025893
GATA zinc finger domain containing 2Ab.
    
 
 0.622
ENSCHAP00000009568
annotation not available
    
 
 0.565
ENSCHAP00000022178
Metastasis associated 1.
    
 
 0.565
mta2
Metastasis associated 1 family member 2.
    
 
 0.565
ENSCHAP00000050443
Metastasis associated 1 family, member 3.
    
 
 0.565
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.525
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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