STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000027006PR domain containing 2, with ZNF domain b. (1581 aa)    
Predicted Functional Partners:
LOC105909948
Histone-lysine N-methyltransferase SETMAR.
    
 0.830
ENSCHAP00000037620
SET and MYND domain containing 3.
    
 0.807
ENSCHAP00000040083
annotation not available
     
 0.782
ENSCHAP00000017762
annotation not available
  
 0.767
ENSCHAP00000033319
Lysine (K)-specific methyltransferase 2E.
   
 
 0.763
ENSCHAP00000001147
SET and MYND domain containing 1a.
    
 0.722
ENSCHAP00000006386
Nuclear receptor binding SET domain protein 3.
   
 0.712
ENSCHAP00000049677
Nuclear receptor binding SET domain protein 2.
   
 0.712
LOC105893664
Histone-lysine N-methyltransferase SUV39H1-like.
    
 0.662
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
 0.662
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.