STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000027172annotation not available (145 aa)    
Predicted Functional Partners:
myh9
Myosin heavy chain 9.
   
 0.903
myl1
Myosin light chain 1.
   
 0.892
LOC105913012
Myosin light chain 4-like.
   
 0.881
myl3
Myosin light chain 3.
   
 0.881
actb
Actin, cytoplasmic 1.
   
 0.876
LOC105897346
Myosin light polypeptide 6.
   
 0.871
ENSCHAP00000039986
Rho-associated, coiled-coil containing protein kinase 2a.
    
 0.869
myl4
Myosin light chain 4.
   
 0.868
ENSCHAP00000002752
Cardiac myosin light chain-1.
   
 0.862
ENSCHAP00000006916
Zgc:163073.
   
 0.862
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.