STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000027587Solute carrier family 9 member A5. (967 aa)    
Predicted Functional Partners:
chp1
Calcineurin like EF-hand protein 1.
   
 0.932
LOC105901568
Calcineurin subunit B type 1-like.
   
 0.763
ENSCHAP00000010125
Tescalcin a.
   
 0.723
cib1
Calcium and integrin binding 1.
   
 0.694
abcg8
ATP binding cassette subfamily G member 8.
    
 0.639
ENSCHAP00000046453
ATP-binding cassette, sub-family G (WHITE), member 5.
    
 0.638
ATP4B
ATPase H+/K+ transporting subunit beta.
     
 0.630
ENSCHAP00000044916
ATPase Na+/K+ transporting subunit beta 4.
     
 0.630
ENSCHAP00000019617
annotation not available
   
  0.622
ENSCHAP00000012910
Moesin b.
     
 0.602
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.