STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000027755Calmegin. (662 aa)    
Predicted Functional Partners:
ENSCHAP00000037373
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.951
ENSCHAP00000011930
Heat shock protein 5.
   
 0.948
ENSCHAP00000012252
annotation not available
   
 0.948
ENSCHAP00000004633
Calreticulin 3b.
   
0.947
ENSCHAP00000035341
Calreticulin.
   
0.947
mogs
Mannosyl-oligosaccharide glucosidase.
    
 
 0.924
ENSCHAP00000058341
Ankyrin repeat domain 45.
   
 0.891
ENSCHAP00000030374
Glucosidase, alpha; neutral AB.
    
 0.872
ENSCHAP00000049244
Zgc:171967.
    
 0.872
ENSCHAP00000020105
Si:ch211-274f20.2.
  
  
 
0.853
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.