STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpatch3G-patch domain containing 3. (526 aa)    
Predicted Functional Partners:
ENSCHAP00000000459
Zinc finger protein 408.
   
    0.987
fkbp14
FKBP prolyl isomerase 14.
    
 
 0.599
rspry1
Ring finger and SPRY domain containing 1.
      
 0.534
efcab1
EF-hand calcium binding domain 1.
      
 0.534
eaf1
ELL associated factor 1.
      
 0.533
ENSCHAP00000002042
ADP-ribosylation factor-like 2 binding protein.
      
 0.528
ENSCHAP00000018470
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).
      
 0.528
ENSCHAP00000011131
Angiopoietin 2b.
   
  
 0.525
LOC105903726
E3 ubiquitin-protein ligase ZNRF2-like.
      
 0.524
ENSCHAP00000019232
Methyltransferase like 6.
      
 0.519
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.