STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kyat3Kynurenine aminotransferase 3. (450 aa)    
Predicted Functional Partners:
ENSCHAP00000050025
Kynurenine 3-monooxygenase.
  
 
 0.926
aadat
Aminoadipate aminotransferase.
  
 0.924
ENSCHAP00000026490
Kynureninase.
   
 
 0.919
ENSCHAP00000014478
Arylformamidase.
  
 
 0.908
ENSCHAP00000033002
annotation not available
  
 0.907
GOT2
Aspartate aminotransferase, mitochondrial-like.
  
 0.907
ppcs
Phosphopantothenoylcysteine synthetase.
  
  0.894
ENSCHAP00000026988
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.893
LOC105908670
Cystathionine beta-synthase-like.
  
 
 0.891
LOC105895275
Aspartate aminotransferase, cytoplasmic-like.
  
 0.884
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.