STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000028098NOP2/Sun RNA methyltransferase 3. (427 aa)    
Predicted Functional Partners:
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.976
ENSCHAP00000008125
GTP binding protein 4.
   
 0.963
ENSCHAP00000001424
annotation not available
    
 0.961
ENSCHAP00000051880
EBNA1 binding protein 2.
   
 0.956
nip7
Nucleolar pre-rRNA processing protein NIP7.
  
 0.954
ENSCHAP00000006597
Pescadillo.
   
 0.952
ENSCHAP00000057247
Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA.
   
  0.952
noc3l
NOC3 like DNA replication regulator.
   
 0.950
ENSCHAP00000002502
annotation not available
   
 0.940
rsl24d1
Ribosomal L24 domain containing 1.
   
 0.927
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.