STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895463Speedy protein A-like. (346 aa)    
Predicted Functional Partners:
ENSCHAP00000040485
Cyclin-dependent kinase 2.
    
  0.860
cdk1
Cyclin dependent kinase 1.
    
  0.860
ENSCHAP00000002698
HESX homeobox 1.
    
 
 0.839
ENSCHAP00000044126
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.839
CDC25B
Cell division cycle 25B.
   
 
  0.824
ENSCHAP00000028274
annotation not available
   
 
  0.824
ENSCHAP00000020068
Myosin VIb.
    
 
 0.793
ENSCHAP00000033918
Myosin VIa.
    
 
 0.793
ENSCHAP00000033815
Cyclin-dependent kinase 6.
    
  0.718
ENSCHAP00000037520
Cyclin-dependent kinase 4.
    
  0.718
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.