STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000028191annotation not available (442 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.966
gle1
GLE1 RNA export mediator.
    
 0.697
ENSCHAP00000007939
Ribosomal protein S28.
   
  0.669
ENSCHAP00000028950
Fraser extracellular matrix complex subunit 1.
    
 0.661
ENSCHAP00000009160
RAN binding protein 2.
   
 
  0.655
rps11
Ribosomal protein S11.
   
 0.650
ENSCHAP00000016350
Fras1 related extracellular matrix 1a.
    
 0.646
ENSCHAP00000022264
Fras1 related extracellular matrix 1b.
    
 0.646
RPS29
Ribosomal protein S29.
   
  0.644
rps12
Ribosomal protein S12.
   
  0.643
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.