STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105893671Transforming protein RhoA-like. (193 aa)    
Predicted Functional Partners:
ENSCHAP00000016490
Intersectin 2b.
    
 0.982
ENSCHAP00000057857
Intersectin 2a.
    
 0.982
ENSCHAP00000000387
annotation not available
    
 0.956
ENSCHAP00000035267
Intersectin 1 (SH3 domain protein).
    
 0.956
ENSCHAP00000039986
Rho-associated, coiled-coil containing protein kinase 2a.
   
 0.939
rock1
Rho associated coiled-coil containing protein kinase 1.
   
 0.935
ENSCHAP00000005643
Rho guanine nucleotide exchange factor (GEF) 1b.
   
 0.929
ENSCHAP00000015584
Rho/rac guanine nucleotide exchange factor (GEF) 2.
   
 0.929
ENSCHAP00000011816
Rho GTPase activating protein 35a.
    
 0.927
ENSCHAP00000023850
Rho GTPase activating protein 5.
    
 0.927
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.