STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a4Solute carrier family 38 member 4. (541 aa)    
Predicted Functional Partners:
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.766
LOC105906309
Ras-related GTP-binding protein A.
   
 0.764
ENSCHAP00000028304
annotation not available
    
 0.761
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.760
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.757
ENSCHAP00000031569
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.660
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.648
RIMS2-2
Regulating synaptic membrane exocytosis 2.
   
 
 0.648
ENSCHAP00000025311
ATPase H+ transporting V0 subunit d1.
    
 0.647
LOC105890390
Ras-related GTP-binding protein C-like.
    
 0.636
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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