STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ak5Adenylate kinase 5. (570 aa)    
Predicted Functional Partners:
atp5f1c
ATP synthase F1 subunit gamma.
   
 
 0.916
aprt
Adenine phosphoribosyltransferase.
  
 
 0.913
ENSCHAP00000052910
Adenylate kinase 6.
     
 0.900
ENSCHAP00000049610
annotation not available
  
 
 0.894
ENSCHAP00000058691
NME/NM23 family member 8.
  
 
 0.894
ak8
Adenylate kinase 8.
   
0.891
rrm1
Ribonucleotide reductase catalytic subunit M1.
    
 0.887
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.883
ampd1
Adenosine monophosphate deaminase 1.
   
 
 0.880
atp5f1a
methyl-CpG-binding domain protein 2-like.
  
 
 0.880
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.