STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000028600Un-named hu7910. (572 aa)    
Predicted Functional Partners:
CASQ2
Calsequestrin-2-like.
   
 
 0.906
ENSCHAP00000033366
annotation not available
   
 
 0.891
ENSCHAP00000052746
Calsequestrin 1a.
   
 
 0.891
ENSCHAP00000036437
annotation not available
 
   
  0.857
ENSCHAP00000034291
Ryanodine receptor 2b (cardiac).
   
 
 0.788
ENSCHAP00000062539
Ryanodine receptor 1b (skeletal).
   
 
 0.764
ENSCHAP00000015505
annotation not available
   
 
 0.751
ENSCHAP00000036610
Ryanodine receptor 3.
   
 
 0.731
RYR3
Ryanodine receptor 3.
   
 
 0.731
RYR2
Ryanodine receptor 2.
   
 
 0.701
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.