STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000028697annotation not available (490 aa)    
Predicted Functional Partners:
uxs1
UDP-glucuronate decarboxylase 1.
 0.996
gale
UDP-galactose-4-epimerase.
  
 
 0.925
gmds
GDP-mannose 4,6-dehydratase.
  
 
 0.924
ENSCHAP00000025482
annotation not available
    
 0.923
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
 
 0.907
ENSCHAP00000030331
UDP-glucose pyrophosphorylase 2a.
     
 0.867
sord
Sorbitol dehydrogenase.
  
 
 0.867
ENSCHAP00000012190
Galactose-1-phosphate uridylyltransferase.
   
 0.863
mat2b
Methionine adenosyltransferase 2B.
  
 0.862
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.859
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.