STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itgb1bp1Integrin subunit beta 1 binding protein 1. (199 aa)    
Predicted Functional Partners:
krit1
KRIT1 ankyrin repeat containing.
    
 
 0.977
ENSCHAP00000055339
FERM domain containing 8.
    
 
 0.909
ccm2
CCM2 scaffold protein.
    
 
 0.874
ccm2l
CCM2 like scaffold protein.
    
 
 0.752
ENSCHAP00000010301
Integrin, beta 1b.
    
 
 0.712
ENSCHAP00000029695
annotation not available
    
 
 0.712
LOC105907972
Integrin beta-2-like.
    
 
 0.712
ENSCHAP00000035381
Integrin, beta 2.
    
 
 0.712
ENSCHAP00000037948
annotation not available
    
 
 0.712
itgb5
Integrin subunit beta 5.
    
 
 0.620
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.