STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000028935WW domain binding protein 1-like b. (395 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
    
 0.898
ENSCHAP00000059679
Actin related protein 5.
    
 0.889
ino80c
INO80 complex subunit C.
    
 0.853
LOC105888489
ruvB-like 2.
    
 0.785
RUVBL2
ruvB-like 2.
    
 0.785
ENSCHAP00000054960
Actin related protein 8.
    
 0.760
ENSCHAP00000024798
Craniofacial development protein 1.
   
 
  0.594
ENSCHAP00000041767
Actin-like 6B.
    
 0.568
actl6a
Actin like 6A.
    
 0.568
ENSCHAP00000014458
E1A binding protein p400.
    
  0.547
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]