STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029009Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (753 aa)    
Predicted Functional Partners:
stip1
Stress induced phosphoprotein 1.
  
 0.995
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.978
ENSCHAP00000020723
Protein phosphatase 5, catalytic subunit.
    
 0.977
stub1
STIP1 homology and U-box containing protein 1.
    
 0.972
ENSCHAP00000042877
FKBP prolyl isomerase 4.
   
 0.968
LOC105906841
Prostaglandin E synthase 3-like.
   
 0.966
LOC105897344
Prostaglandin E synthase 3-like.
   
 0.966
cct2
Chaperonin containing TCP1 subunit 2.
  
 0.959
ppid
Peptidylprolyl isomerase D.
  
 0.955
ENSCHAP00000022877
Cell division cycle 37 homolog (S. cerevisiae).
    
 0.954
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.