STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029087Cilia and flagella associated protein 77. (243 aa)    
Predicted Functional Partners:
ENSCHAP00000029821
Sperm acrosome associated 9.
   
 
 0.826
LOC105892007
Chromosome unknown open reading frame, human C5orf49.
   
   0.794
ENSCHAP00000000708
Chromosome 11 open reading frame 1.
   
   0.779
ENSCHAP00000028636
Enkurin, TRPC channel interacting protein.
   
   0.779
ENSCHAP00000043243
Si:ch211-226m7.4.
   
   0.779
LOC105893651
Chromosome unknown open reading frame, human C1orf194.
   
   0.779
ENSCHAP00000034720
Cilia and flagella associated protein 126.
   
   0.776
ENSCHAP00000033077
Family with sequence similarity 166 member B.
    
   0.770
C9orf135
Chromosome 9 open reading frame 135.
    
   0.770
ENSCHAP00000057468
Sperm associated antigen 8.
    
   0.770
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.