STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029100Cell adhesion molecule 1b. (404 aa)    
Predicted Functional Partners:
ENSCHAP00000035322
Nectin cell adhesion molecule 3b.
    
0.757
ENSCHAP00000023781
annotation not available
    
0.755
ENSCHAP00000016336
Cell adhesion molecule 3.
     
0.613
ENSCHAP00000039842
annotation not available
     
0.613
ENSCHAP00000023028
annotation not available
    
 
0.606
ENSCHAP00000023160
annotation not available
    
  0.606
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
  0.517
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.517
ENSCHAP00000033416
annotation not available
    
 
0.506
ENSCHAP00000038167
annotation not available
    
 0.489
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.