STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029157Protein phosphatase 2, regulatory subunit B, delta. (452 aa)    
Predicted Functional Partners:
ppp2ca
Protein phosphatase 2 catalytic subunit alpha.
   
 0.983
LOC105895368
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
 0.981
ppp2cb
Protein phosphatase 2 catalytic subunit beta.
   
 0.981
LOC105903801
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.981
LOC105902388
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
  
 
0.972
ENSCHAP00000036290
Protein phosphatase 4, catalytic subunit b.
    
 0.971
ptpa
Protein phosphatase 2 phosphatase activator.
    
 0.962
ENSCHAP00000045294
Protein phosphatase 2, regulatory subunit B', alpha isoform.
    
 0.954
tcp1
T-complex 1.
   
 0.942
ENSCHAP00000010391
Chaperonin containing TCP1, subunit 7 (eta).
   
  0.939
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.