STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029230annotation not available (511 aa)    
Predicted Functional Partners:
ENSCHAP00000054120
Coiled-coil domain containing 151.
  
 0.943
ENSCHAP00000013592
Armadillo repeat containing 4.
   
 0.787
ENSCHAP00000060746
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 0.776
dnai2
Dynein axonemal intermediate chain 2.
    
 0.744
ENSCHAP00000049610
annotation not available
    
 0.742
ENSCHAP00000058691
NME/NM23 family member 8.
    
 0.742
LOC105895390
Radial spoke head protein 6 homolog A-like.
   
  
 0.741
ENSCHAP00000024834
Dynein regulatory complex subunit 3.
   
 
 0.733
efcab1
EF-hand calcium binding domain 1.
    
 0.732
ENSCHAP00000019976
Armadillo repeat containing 3.
   
 0.711
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.