STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ephx2Epoxide hydrolase 2. (561 aa)    
Predicted Functional Partners:
ENSCHAP00000019596
Peroxisomal biogenesis factor 5.
   
 0.985
ENSCHAP00000035232
Peroxisomal biogenesis factor 5-like b.
   
 0.985
ENSCHAP00000056517
Peroxisomal biogenesis factor 5-like a.
   
 0.985
pex13
Peroxisomal biogenesis factor 13.
    
 0.983
pex12
Peroxisomal biogenesis factor 12.
   
 
  0.983
ENSCHAP00000011890
Family with sequence similarity 185 member A.
   
 
  0.982
ENSCHAP00000042236
Peroxisomal biogenesis factor 14.
   
 
  0.982
pex2
Peroxisomal biogenesis factor 2.
   
 
  0.981
rps27a
Ribosomal protein S27a.
   
 
  0.981
ENSCHAP00000027745
Pseudouridine 5'-phosphatase.
  
 0.946
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.