STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrngCholinergic receptor nicotinic gamma subunit. (540 aa)    
Predicted Functional Partners:
LOC105906770
Neuronal acetylcholine receptor subunit alpha-2-like.
  
 
 
0.954
ENSCHAP00000017344
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
0.927
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
0.927
chrne
Cholinergic receptor nicotinic epsilon subunit.
  
  
 
0.925
ENSCHAP00000034401
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
  
 
0.925
ENSCHAP00000029187
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
  
 
 
0.862
ENSCHAP00000042095
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
  
 
0.829
ENSCHAP00000022088
annotation not available
  
  
 
0.827
ENSCHAP00000023968
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
 
0.819
ENSCHAP00000030512
Si:ch211-39a7.1.
   
0.666
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.