STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eml2EMAP like 2. (878 aa)    
Predicted Functional Partners:
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.866
ENSCHAP00000028521
Cleavage and polyadenylation specific factor 1.
   
 0.820
ENSCHAP00000011669
BUB3 mitotic checkpoint protein.
   
 0.816
ENSCHAP00000017412
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.804
tex10
Testis expressed 10.
   
 0.799
ENSCHAP00000012123
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.799
ENSCHAP00000049093
annotation not available
   
 0.798
ENSCHAP00000058921
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.798
taf10
TATA-box binding protein associated factor 10.
    
 0.797
cdc16
Cell division cycle 16.
   
 0.797
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.