STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1CRasGEF domain family member 1C. (479 aa)    
Predicted Functional Partners:
ENSCHAP00000000878
RAS-like, family 11, member B.
    
 0.625
LOC105905287
Dexamethasone-induced Ras-related protein 1-like.
    
 0.613
LOC105907074
Ras-related protein Rap-2b-like.
    
 0.613
LOC105896462
Dexamethasone-induced Ras-related protein 1-like.
    
 0.613
rap1a
RAP1A, member of RAS oncogene family.
    
 0.613
LOC105892655
GTPase HRas-like.
    
 0.613
ENSCHAP00000010921
Zgc:55558.
    
 0.613
ENSCHAP00000012599
RASD family member 3.
    
 0.613
rras
RAS related.
    
 0.613
DIRAS1
GTP-binding protein Di-Ras1.
    
 0.613
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.