STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029788Epidermal growth factor receptor pathway substrate 8a. (841 aa)    
Predicted Functional Partners:
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
   
 0.845
ENSCHAP00000027640
annotation not available
   
  0.764
ENSCHAP00000045526
Abhydrolase domain containing 12.
   
 
  0.749
ENSCHAP00000049505
Membrane protein, palmitoylated 1.
    
 0.744
ENSCHAP00000048910
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.696
LOC105891600
Glutamate receptor ionotropic, NMDA 1-like.
    
  0.650
ENSCHAP00000056897
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
    
  0.650
gria2
Glutamate ionotropic receptor AMPA type subunit 2.
   
  0.628
ENSCHAP00000061965
Glutamate receptor, ionotropic, AMPA 2a.
   
  0.628
ENSCHAP00000059737
Espin.
     
 0.623
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.