STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029824Pleckstrin and Sec7 domain containing 3, like. (1033 aa)    
Predicted Functional Partners:
ENSCHAP00000052596
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
0.662
ENSCHAP00000011036
ADP-ribosylation factor 6a.
    
 
 0.566
ENSCHAP00000041469
ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited).
     
0.543
ENSCHAP00000041569
ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited).
     
0.543
LOC105908857
Cytohesin-4-like.
     
0.532
fbxo8
F-box protein 8.
     
0.532
ENSCHAP00000007391
Cytohesin 4a.
   
 
0.530
ENSCHAP00000023529
Cytohesin 3a.
     
0.530
ENSCHAP00000025211
Cytohesin 2.
     
0.530
ENSCHAP00000026034
Cytohesin 1a.
     
0.530
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.