STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029932N-acetylglucosaminidase, alpha. (754 aa)    
Predicted Functional Partners:
ENSCHAP00000009110
Si:dkey-192p21.6.
     
 0.912
ENSCHAP00000044069
Heparan-alpha-glucosaminide N-acetyltransferase.
     
 0.912
tmed10
Transmembrane p24 trafficking protein 10.
    
   0.750
sgsh
N-sulfoglucosamine sulfohydrolase.
   
  
 0.580
tmed4
Transmembrane p24 trafficking protein 4.
    
   0.572
tmed9
Transmembrane p24 trafficking protein 9.
    
   0.572
LOC105890776
Telethonin-like.
      
 0.569
ENSCHAP00000023657
Si:ch211-255i20.3.
    
   0.567
ENSCHAP00000002142
Peroxisomal biogenesis factor 7.
      
 0.539
arsg
Arylsulfatase G.
   
  
 0.539
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.