STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000029994DnaJ (Hsp40) homolog, subfamily C, member 9. (253 aa)    
Predicted Functional Partners:
bag2
BCL2 associated athanogene 2.
    
 0.902
ENSCHAP00000020966
Proteasome (prosome, macropain) assembly chaperone 1.
   
  0.901
tcp1
T-complex 1.
  
 0.883
ENSCHAP00000010391
Chaperonin containing TCP1, subunit 7 (eta).
  
 0.883
cct4
Chaperonin containing TCP1 subunit 4.
  
 0.883
cct2
Chaperonin containing TCP1 subunit 2.
  
 0.883
cct6a
Chaperonin containing TCP1 subunit 6A.
  
 0.883
cct5
Chaperonin containing TCP1 subunit 5.
  
 0.883
stip1
Stress induced phosphoprotein 1.
  
 0.875
ENSCHAP00000020723
Protein phosphatase 5, catalytic subunit.
   
 0.860
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.