STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000030013COP9 signalosome subunit 9. (75 aa)    
Predicted Functional Partners:
cops3
COP9 signalosome subunit 3.
    
 0.984
cops5
COP9 signalosome subunit 5.
   
 0.973
COPS6
COP9 signalosome subunit 6.
    
 0.972
cops8
COP9 signalosome subunit 8.
    
 0.972
cops2
COP9 signalosome subunit 2.
    
 0.963
COPS7B
COP9 signalosome subunit 7A.
    
 0.945
LOC105899958
COP9 signalosome complex subunit 1.
    
  0.920
GPS1
G protein pathway suppressor 1.
    
  0.920
ENSCHAP00000039121
Protein phosphatase 1, regulatory subunit 42.
   
 0.913
stoml2
Stomatin like 2.
   
 
  0.909
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.