STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alg3ALG3 alpha-1,3- mannosyltransferase. (486 aa)    
Predicted Functional Partners:
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
 0.996
dpm1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
   
 0.989
alg6
ALG6 alpha-1,3-glucosyltransferase.
    
 0.988
ENSCHAP00000032415
ALG11 alpha-1,2-mannosyltransferase.
    
 0.948
ENSCHAP00000023064
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
   
 
 0.905
ENSCHAP00000023106
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
   
 
 0.905
ENSCHAP00000039826
Phosphatidylinositol glycan anchor biosynthesis, class B.
     
 0.905
LOC105910213
Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1.
    
 
 0.902
ENSCHAP00000021709
BAR/IMD domain containing adaptor protein 2 like 1b.
    
 
 0.902
ENSCHAP00000023078
Zgc:158689.
    
 
 0.902
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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