STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000030391annotation not available (138 aa)    
Predicted Functional Partners:
ENSCHAP00000004681
annotation not available
   
 
 0.612
ENSCHAP00000031243
Src kinase associated phosphoprotein 1.
   
 
 0.574
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
  0.517
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.517
ENSCHAP00000038167
annotation not available
    
 0.489
ENSCHAP00000033549
Zeta chain of T cell receptor associated protein kinase 70.
   
 0.487
ENSCHAP00000042878
Spleen tyrosine kinase.
   
 0.487
ENSCHAP00000047229
Protein tyrosine phosphatase non-receptor type 6.
   
  0.481
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
  0.481
LOC105898973
Tyrosine-protein phosphatase non-receptor type 11-like.
   
  0.481
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.