STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000030664Multiple inositol-polyphosphate phosphatase 1a. (451 aa)    
Predicted Functional Partners:
tpk1
Thiamin pyrophosphokinase 1.
     
 0.911
ENSCHAP00000028364
Thiamin pyrophosphokinase 2.
    
 0.909
itpk1
Inositol-tetrakisphosphate 1-kinase.
     
 0.900
ENSCHAP00000013926
Inositol polyphosphate multikinase a.
    
 0.892
ipmk
Inositol polyphosphate multikinase.
    
 0.892
ENSCHAP00000062356
Acid phosphatase 7, tartrate resistant (putative).
     
 0.888
ENSCHAP00000047399
annotation not available
     
 0.884
cpped1
Calcineurin like phosphoesterase domain containing 1.
     
 0.868
chdh
Choline dehydrogenase.
     
 0.867
LOC105889258
Tartrate-resistant acid phosphatase type 5-like.
     
 0.863
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.