STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a9Solute carrier family 38 member 9. (552 aa)    
Predicted Functional Partners:
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.993
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.992
ENSCHAP00000028304
annotation not available
    
 0.991
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
 0.990
LOC105906309
Ras-related GTP-binding protein A.
   
 0.964
LOC105890390
Ras-related GTP-binding protein C-like.
    
 0.933
LOC105908365
Ras-related GTP-binding protein D-like.
    
 0.933
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.906
ENSCHAP00000025311
ATPase H+ transporting V0 subunit d1.
    
 0.858
c9orf72
C9orf72-SMCR8 complex subunit.
    
  0.837
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.