STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000030795annotation not available (134 aa)    
Predicted Functional Partners:
ENSCHAP00000000456
annotation not available
   
 0.999
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.996
ENSCHAP00000022879
UBX domain protein 7.
    
 0.995
ENSCHAP00000054339
annotation not available
   
 0.989
trip12
Thyroid hormone receptor interactor 12.
   
 0.979
LOC105899975
Next to BRCA1 gene 1 protein-like.
   
 0.963
ENSCHAP00000031450
NBR1 autophagy cargo receptor a.
   
 0.963
rps25
Ribosomal protein S25.
   
 0.961
ENSCHAP00000040378
Ribosomal protein S3A.
   
 0.958
ENSCHAP00000000418
Ribosomal protein S21.
   
  0.956
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.