STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000030845annotation not available (256 aa)    
Predicted Functional Partners:
btf3
Basic transcription factor 3.
   
 0.979
btf3l4
Basic transcription factor 3 like 4.
   
 0.969
rpl17
Ribosomal protein L17.
   
 
 0.929
LOC105891117
60S ribosomal protein L13.
   
   0.927
rpl23a
Ribosomal protein L23a.
   
 
 0.925
rpl4
Ribosomal protein L4.
   
 
 0.925
rpl18
Ribosomal protein L18.
   
 
 0.920
LOC105890639
60S ribosomal protein L10.
  
   0.919
RPL7A
Ribosomal protein L7a.
   
   0.917
ENSCHAP00000051592
Ribosomal protein L24.
   
   0.917
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.