STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psen2Presenilin 2. (446 aa)    
Predicted Functional Partners:
ENSCHAP00000012329
Presenilin enhancer, gamma-secretase subunit.
    
 0.994
NCSTN
Nicastrin.
   
 0.994
ENSCHAP00000038242
Zgc:114200.
   
 0.993
notch1
Notch receptor 1.
    
 0.961
ENSCHAP00000062382
annotation not available
    
 0.961
ENSCHAP00000025324
annotation not available
    
 0.898
CTNNB1
Catenin beta 1.
    
 0.898
ENSCHAP00000047167
Notch receptor 3.
    
 0.896
ENSCHAP00000054630
Notch receptor 2.
    
 0.893
tmed10
Transmembrane p24 trafficking protein 10.
    
 0.882
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.