STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000031079Exocyst complex component 3. (749 aa)    
Predicted Functional Partners:
ENSCHAP00000024034
Exocyst complex component 1.
    
 0.997
ENSCHAP00000032485
Exocyst complex component 5.
   
 0.997
exoc4
Exocyst complex component 4.
   
 0.997
ENSCHAP00000053656
annotation not available
    
 0.997
ENSCHAP00000051709
Exocyst complex component 6.
    
 0.987
ENSCHAP00000035480
Exocyst complex component 6B.
    
 0.983
ENSCHAP00000002947
annotation not available
   
 0.967
ENSCHAP00000036793
Exocyst complex component 7.
   
 0.967
ENSCHAP00000046823
Si:dkey-245p14.4.
    
 0.950
ENSCHAP00000010340
annotation not available
     
0.927
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.