STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000031217HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4789 aa)    
Predicted Functional Partners:
rnf8
Ring finger protein 8.
   
 0.858
ENSCHAP00000009160
RAN binding protein 2.
   
 0.772
ENSCHAP00000006565
annotation not available
    
 0.768
ENSCHAP00000041211
Neuralized E3 ubiquitin protein ligase 4.
    
 
 0.747
ENSCHAP00000022441
Dedicator of cytokinesis 10.
    
   0.737
ENSCHAP00000062146
BRCA1 associated RING domain 1.
   
 0.730
ENSCHAP00000030291
Ubiquitin B.
    
 0.727
ENSCHAP00000020098
Protein inhibitor of activated STAT, 4b.
    
 0.725
ENSCHAP00000036254
Ring finger protein 168.
    
 0.718
babam2
BRISC and BRCA1 A complex member 2.
    
 0.715
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.