STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000031273annotation not available (524 aa)    
Predicted Functional Partners:
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
     
 0.752
LOC105889015
Aromatase-like.
   
 0.606
ENSCHAP00000020415
Cytochrome P450, family 3, subfamily A, polypeptide 65.
   
 0.587
ENSCHAP00000024526
annotation not available
   
 0.587
ENSCHAP00000053337
annotation not available
   
 0.587
ENSCHAP00000043293
Myo-inositol oxygenase.
   
 
  0.583
LOC105893755
Probable glucuronokinase 2.
   
 
  0.577
ENSCHAP00000028495
Transmembrane O-methyltransferase.
    
 0.576
LOC105899056
Catechol O-methyltransferase-like.
    
 0.568
LOC105895513
Cytochrome P450 26B1.
   
 0.567
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.