STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000031370Estrogen receptor 2a. (574 aa)    
Predicted Functional Partners:
ENSCHAP00000001851
annotation not available
    
 0.986
ENSCHAP00000035133
annotation not available
   
0.961
ENSCHAP00000024681
E1A binding protein p300 a.
    
 0.952
ENSCHAP00000031900
E1A binding protein p300 b.
    
 0.952
LOC105904441
Nuclear receptor-interacting protein 1-like.
    
 0.952
ENSCHAP00000025501
CREB binding protein a.
    
 0.951
LOC105889814
Proto-oncogene c-Fos-like.
    
 0.950
gtf2b
General transcription factor IIB.
    
 0.945
taf10
TATA-box binding protein associated factor 10.
    
 0.942
ENSCHAP00000019849
Nuclear receptor corepressor 2.
    
 0.938
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.