STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm9Translocase of inner mitochondrial membrane 9. (89 aa)    
Predicted Functional Partners:
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.999
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.998
timm29
Translocase of inner mitochondrial membrane 29.
   
 0.997
timm13
Translocase of inner mitochondrial membrane 13.
   
 0.997
agk
Acylglycerol kinase.
    
 0.996
timm8b
Translocase of inner mitochondrial membrane 8 homolog B.
   
 0.996
ENSCHAP00000045474
Cactin.
   
 0.994
LOC105893756
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial-like.
    
 0.984
sdhc
Succinate dehydrogenase complex subunit C.
   
 0.953
ENSCHAP00000003454
annotation not available
   
 0.950
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.